Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Multidrug resistance protein MdtN from Alteromonas macleodii MIT1002

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 75/282 (26%), Positives = 142/282 (50%), Gaps = 12/282 (4%)

Query: 33  VTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKA 92
           V+  G+IE+ +  IS+KV GR++++ V +GD+V  G ++  L +  I+++L+QA A  + 
Sbjct: 33  VSGNGRIEATEIGISAKVAGRVEEIYVSEGDRVTAGDVVAKLDTTTINSQLQQAKAQHQQ 92

Query: 93  AGALAQEAENGA---REQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDE 149
           A + A EA N A   R+ +  A +   L+ +A  + AE    R N L   G VS+Q  ++
Sbjct: 93  AKS-AVEAANMAVAQRQSEKSALEAALLQTKAELKAAEAHAARTNELAKTGAVSKQLAED 151

Query: 150 AQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGA----VAEVEAYAADTK 205
             T  ++AK   +AA    +L    A  E  +A    A+ A  A    +A++++   D  
Sbjct: 152 NLTNVESAKAAVNAA--KARLTAADATIEASRAQYYSAQAAVSAANATIAQIQSEINDMV 209

Query: 206 IQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLP 265
           +++  +G +   ++  GE+   G  V+++VD  + +  F +    +   T G +    L 
Sbjct: 210 LKAPRNGRIQYRVVEPGEVVGAGGRVLSLVDLTNVYMTFFLPASQVGKLTMGGEALIVLD 269

Query: 266 AL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEAR 306
           A  + +I   +++VA +  F T +S +     +   F V+A+
Sbjct: 270 AAPDIAIPATISYVADVAQF-TPKSVETQSEREKLMFRVKAQ 310