Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 8/280 (2%)

Query: 33  VTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKA 92
           V   G+IE+ +  IS+K  GR+  ++VR+GD V+ GQ++  + + +++AK  QA A  + 
Sbjct: 36  VASNGRIEAVEIDISTKTAGRLQDIMVREGDFVKAGQVLAQMDTAQLEAKKRQAEAQLRR 95

Query: 93  AGALAQEAENGAREQQIQAAKDQWLKAQAAAEL--AEKTYLRVNNLYNDGVVSEQKRDEA 150
           A      A +   +++ +      +  Q  A+L  A KTY R   L     VS+Q  D++
Sbjct: 96  AKIAIDTAHSLVAQREAEKTSALAVVEQRKAQLDSASKTYARSRQLLTGNAVSQQIVDDS 155

Query: 151 QTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAY---AADTKIQ 207
           +   Q+A+ T ++A Q    A + A    K   ++       A A++E+      D  ++
Sbjct: 156 EATEQSARATLASA-QASLAASDAAINAAKAQIIDAEAAVDAAQADIESIETDIVDATLK 214

Query: 208 SWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPAL 267
           S  DG V   +   GE+   G  V+ +VD  D +  F +        + G+     L A 
Sbjct: 215 SPRDGRVQYRIAQPGEVLSAGGRVLNLVDLGDVYMTFFLPTAEAGRTSMGSDVRLILDAA 274

Query: 268 NK-SIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEAR 306
            + +I  KV+ VA +  F T ++ +  +     TF V A+
Sbjct: 275 PQYTIPAKVSFVADVAQF-TPKTVETEEERQKLTFRVRAQ 313