Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Colistin resistance protein EmrA from Acinetobacter radioresistens SK82

 Score = 73.6 bits (179), Expect = 7e-18
 Identities = 86/339 (25%), Positives = 149/339 (43%), Gaps = 40/339 (11%)

Query: 8   LMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEK 67
           L+ +  + ++ W  +R    +     T    ++ Q   +SS++ G I QV+V+  D V+K
Sbjct: 51  LVLIIGITIILW-AWRLGPFHTAIERTDNSYVKGQTTILSSQINGYIQQVMVKDFDYVKK 109

Query: 68  GQLIFTLLSPEIDAKL--EQAIAGQKAAGALAQEAENGAREQQ---------IQAAKDQW 116
           GQ +       IDAK   EQ +     A A  ++AEN    Q+         I AA+ Q 
Sbjct: 110 GQPLL-----RIDAKTYGEQVV----QAEAAVEQAENNLANQEQAIAQHRADIAAAQAQV 160

Query: 117 LKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAR 176
            + +A  ELA     R   L N G  S+ ++D A    + A+    A L+  +   E AR
Sbjct: 161 EQVKAQYELARSQLQRYQQLGNSGAASKTEQDRAAADVKNAQ----AQLRQAEANVEVAR 216

Query: 177 EETKQAALE----KARMAAGAVAEVEAYAAD--TKIQSWFDGEVSQVLMHSGELAPQGFP 230
           E  K A +     KA++      + +A      + I +  DG++ +V    G+    G  
Sbjct: 217 EALKTAQVAQIGLKAQVKNAQAQQAQAQTTQNYSLISAPMDGQLGEVNPRVGQYVAAGSQ 276

Query: 231 VVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALN-KSIEFKVTHV--AVMGDFATW 287
           ++ ++  Q TW + N +E  + +   G + +  + ALN +    +V  +  A   +F+  
Sbjct: 277 LLFLIPKQ-TWVIANFKETQIANMKVGQKASFTVDALNDRQFTGRVERIAPAAGSEFSVI 335

Query: 288 RSTDATQGFDLRTFEVEAR----PVTP-TEGLRMGMSVV 321
           ++ +AT  F      +  R    P  P  + LR GMSV+
Sbjct: 336 KADNATGNFTKVVQRISVRIAIDPNQPGIKDLRPGMSVI 374