Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., peptidase from Pseudomonas simiae WCS417

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 60/292 (20%), Positives = 120/292 (41%), Gaps = 8/292 (2%)

Query: 163 QARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLD 222
           QA    +  YY   + A++ +    A ++   Q       L QQG+    + L+A++  +
Sbjct: 130 QALLVRVLTYYTQALFAQDQIDIARAKKKAFEQQFQQNQHLFQQGEGTRTDILEAESRYE 189

Query: 223 KAKVERKKAQKTLDIAQSALTQILGATET----VEPSGMLFINTSLPPMH--AFIEQTLN 276
            A  E  +A    D +   L  ++G        + P    F   +L P +   + E  ++
Sbjct: 190 LATAEEIQALDEQDASLRELGALIGVQSVNIHDLAPLNQGFAAFTLTPANYDTWHELAIS 249

Query: 277 TYPGLSLLDAKEKQASSLIKAEQGKYYPEVYLYGDYSLHEDDS--LASQMKPDWLVGVGV 334
             P L+      + A   ++  +  + P+V  Y      E DS    +Q      +GV V
Sbjct: 250 NNPTLASQRQALEVARYEVERNRAGHLPKVTAYASSRQQESDSGNTYNQRYDTNTIGVEV 309

Query: 335 NIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGLNSSL 394
           ++PL    G S   + A+ A+ Q  Y      ++  + + + +      + ++     +L
Sbjct: 310 SLPLYAGGGISASTRQASRAMEQAEYELEGKTRETLIELRRQFSACLSGVSKLRAYQKAL 369

Query: 395 NLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYLISLNKL 446
             A+  +   Q++   G   ++D ++AE  L S R   + A ++YL++  KL
Sbjct: 370 VSAEALVVSTQQSILGGERVNLDALNAEQQLYSTRRDLAQARYDYLMAWTKL 421



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 105 LPLVTHLGAAK-------STITER-DIFTSSIRAIWPIFTGGRITAAQDAAAGKEEEAQS 156
           LP VT   +++       +T  +R D  T  +    P++ GG I+A+   A+   E+A+ 
Sbjct: 276 LPKVTAYASSRQQESDSGNTYNQRYDTNTIGVEVSLPLYAGGGISASTRQASRAMEQAEY 335

Query: 157 QLAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQ 216
           +L  + +    +L + + + +     L    A ++ L      AL +  Q  I   ER+ 
Sbjct: 336 ELEGKTRETLIELRRQFSACLSGVSKLR---AYQKALVS--AEALVVSTQQSILGGERV- 389

Query: 217 ADASLDKAKVERKKAQKTLDIAQSALTQILGATE 250
              +LD    E++      D+AQ+    ++  T+
Sbjct: 390 ---NLDALNAEQQLYSTRRDLAQARYDYLMAWTK 420