Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., TolC family outer membrane protein from Variovorax sp. OAS795

 Score = 80.9 bits (198), Expect = 8e-20
 Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 12/313 (3%)

Query: 147 AAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQ 206
           A  + ++A++ L  E Q     ++  YF  +LA+E LA  +A +   T   D A K    
Sbjct: 117 ARAQVDDAEATLERETQNVGVRVSGAYFEALLAEEHLALVLAQKTAYTTQFDAAEKRFGA 176

Query: 207 GQIAHVERLQADASLDKAKVERKKAQKTLDIA----QSALTQILGATETVEPSGMLFINT 262
           G     +  +A A+LD    +  +A++ LD      QS + + +     ++ S M  I  
Sbjct: 177 GLGTRTDIDEARAALDLNVAQELEARQNLDFTRRQIQSLVNRPIDRLAPLDSSRMRLIPP 236

Query: 263 SLPPMHAFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYLYGDYSLHEDDSLAS 322
               + A++ Q     P L  L A+ + A + ++  Q  +YP +     +S  + D++ S
Sbjct: 237 VPAQLEAWVAQAETGSPELQSLVAQVEAARNEVEKAQAGHYPTLDAVAQWSRSDSDTITS 296

Query: 323 QMKPDWL---VGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKA--QAKQDLSVLVEKTY 377
            +K  +    +GV ++IPL      S  V+ A    NQ+R  +A    ++DLSV + + +
Sbjct: 297 -IKTRYTNRSIGVQLSIPLYSGGHVSSTVRQA--LANQLRAEEALEAMRRDLSVRLHREF 353

Query: 378 LEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASF 437
               + + +V  L  ++  A++ +    ++F  G  T  DV++AE    S +   + A F
Sbjct: 354 RGVTEGVLKVRALEQAVRSAEQVVISNSRSFEAGSRTLPDVLNAEQQKVSAQRDLAQARF 413

Query: 438 NYLISLNKLLALS 450
            YL+S  +L AL+
Sbjct: 414 IYLMSRVRLQALA 426