Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., membrane protein from Magnetospirillum magneticum AMB-1

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 9/335 (2%)

Query: 125 TSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLA 184
           T ++    P+F GGR  AA   A       ++QLA   Q      A  Y +VV    VL 
Sbjct: 93  TQALTLSQPLFRGGRTLAATAQAENNVLSERAQLAATEQTILLAAATAYLNVVRDDAVLK 152

Query: 185 TRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQ 244
             I  E+ L +  +   +  + G++   +  QA+A L KA  +R  A+  L  +++    
Sbjct: 153 LSINNEQVLRRQYEATEERFKVGELTRTDVSQAEARLAKATADRVAAEGNLQSSRANYVN 212

Query: 245 ILGATETVEPSGMLFINTSLPPMHAFIEQTLNT----YPGLSLLDAKEKQASSLIKAEQG 300
            +G      P   L      P +   ++   +T     P +   D     A   +    G
Sbjct: 213 NVG-----RPPEALVTPAQPPALPQSLDDVTSTALAANPTVVSADFTHAAAKDGVDLVFG 267

Query: 301 KYYPEVYLYGDYSLHEDDSLASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRY 360
           +  P V L  D S + + S          V + V++PL E+     +V+A+     Q R 
Sbjct: 268 ELLPTVSLSADISRNFETSTRENSSTAREVLLNVSVPLYESGSVYSRVRASKHTAGQRRI 327

Query: 361 LKAQAKQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVD 420
              QA++D      K++   + A  +     + +  ++  L   ++    G  T +DV++
Sbjct: 328 EADQARRDAVETGTKSWETLQAARAQARSYQAQIKASELALAGVREESKVGSRTILDVLN 387

Query: 421 AELYLASIRTQQSLASFNYLISLNKLLALSSEMSS 455
           AE  L   R     A  + L    ++ +   +M++
Sbjct: 388 AEQELFDARVNLVKAQRDVLAGAYQVKSALGQMTA 422