Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Type I secretion outer membrane protein, TolC precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 61.6 bits (148), Expect = 6e-14
 Identities = 85/361 (23%), Positives = 141/361 (39%), Gaps = 38/361 (10%)

Query: 144 QDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKL 203
           Q+ AAG ++        + Q    + A  YF V+ A +VL+   A +E + +  D   + 
Sbjct: 109 QEKAAGIQDVTYQT---DQQTLILNTANAYFKVLNAIDVLSYTQAQKEAIYRQLDQTTQR 165

Query: 204 EQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILGA--TETVEPSGMLFIN 261
              G +A  +   A A  D        A+  LD A   L Q+ G    E    +   F  
Sbjct: 166 FNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEELRQVTGNYYPELASLNVEHFKT 225

Query: 262 TSLPPMHAFIEQTLNTYPGLSLLDAKEKQ--ASSLIKAEQGKYYPEVYLYGDYSLHE--- 316
                ++A +++  N    LSLL A+  Q  A   I+  Q  + P + L     + +   
Sbjct: 226 DKPKAVNALLKEAENR--NLSLLQARLSQDLAREQIRQAQDGHLPTLNLTASTGISDTSY 283

Query: 317 ----------DDSLASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAK 366
                     DDS   Q K    +G+  ++PL +    + QVK A             A 
Sbjct: 284 SGSKTNSTQYDDSNMGQNK----IGLNFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAH 339

Query: 367 QDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLA 426
           + +   V  ++     ++  +     ++  AQ +L   +  +S G  T VDV+DA   L 
Sbjct: 340 RSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLY 399

Query: 427 SIRTQQSLASFNYLI----------SLNK--LLALSSEMSSFSTYHQSAVALSSLHQSAT 474
             + Q + A + YLI          +LN+  LLAL+S +         +VA  +  Q A 
Sbjct: 400 DAKQQLANARYTYLINQLNIKYALGTLNEQDLLALNSTLGKPIPTSPESVAPETPDQDAA 459

Query: 475 A 475
           A
Sbjct: 460 A 460