Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., type I secretion outer membrane protein, TolC family from Enterobacter asburiae PDN3

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 23/290 (7%)

Query: 170 AKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERK 229
           A  YF+V+ A + L+   A ++ + +  D   +    G +A  +   A +  D       
Sbjct: 132 ATAYFNVLSAIDALSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNARSQYDTVLANEV 191

Query: 230 KAQKTLDIAQSALTQILGA--TETVEPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAK 287
            A+  LD A  +L Q+ G    E    +   F       ++A +++  N    LSLL A+
Sbjct: 192 TARNNLDNALESLRQVTGNYYPELASLNVDSFKTDKPQAVNALLKEAENR--NLSLLQAR 249

Query: 288 EKQ--ASSLIKAEQGKYYPEVYLYGDYSLHE-------------DDSLASQMKPDWLVGV 332
             Q  A   I+  Q  + P + L     + +             DDS   Q K    VG+
Sbjct: 250 LSQDLAREQIRQAQDGHLPTLSLSASTGVSDTTYSGSKTNTSQYDDSNMGQNK----VGL 305

Query: 333 GVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGLNS 392
             ++PL +    + QVK A             A +++   V  ++     ++  +     
Sbjct: 306 SFSLPLYQGGQVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNVNASISSINAYKQ 365

Query: 393 SLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYLIS 442
           ++  AQ +L   +  +S G  T VDV+DA   L + + Q S A + YLI+
Sbjct: 366 AVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYQYLIN 415