Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Enterobacter asburiae PDN3

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 72/334 (21%), Positives = 142/334 (42%), Gaps = 25/334 (7%)

Query: 123 IFTSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEV 182
           ++  S+ A + +   G   +  +AA    E  ++  A         +A  Y +++   E 
Sbjct: 122 LYRGSLTASYDVDIWGVNRSTANAAEASLEAQKAAAAAADLTVASSVASGYVTLLSLDE- 180

Query: 183 LATRIAVEEGLTQHRDNALKLEQQ----GQIAHVERLQADASLDKAKVERKKAQKTLDIA 238
              ++ V E   + R+ A  L ++    G  + +E +Q+D+ L   + +    Q  +   
Sbjct: 181 ---QLRVTESTLKSREEAFNLAKRQFETGYSSRLELMQSDSELRSTRAQVPVLQHQIAQQ 237

Query: 239 QSALTQILGA-------TETVEPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAKEKQA 291
           ++AL+ +LG+       +E+ E    L + + LP         LN  P +   + +   A
Sbjct: 238 ENALSLLLGSNPGAVARSESFEALTPLTLPSQLP------STLLNRRPDIVQAERQLVAA 291

Query: 292 SSLIKAEQGKYYPEVYLYGDYSLHEDDSLASQMKPD---WLVGVGVNIPLIENSGRSEQV 348
            + + A +    P + L    S+ +D +L+  +      W VG  +  PL+     + QV
Sbjct: 292 DASLAASRASLLPSINLTATGSI-QDRTLSGLLDNPLQLWSVGGSILAPLLNRQALNAQV 350

Query: 349 KAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAF 408
             + S  NQ  Y   +  ++    V  +     +  E++T L +   +AQE LR+ Q   
Sbjct: 351 DISQSQRNQALYAYEKTVRNAFAEVNNSLDAITRYQEQLTELLAQQEVAQETLRIAQNRN 410

Query: 409 SQGLSTSVDVVDAELYLASIRTQQSLASFNYLIS 442
             G S+ +DV+DA+  L S++T       N L++
Sbjct: 411 RNGYSSYLDVLDAQRTLYSVQTSVVQVKNNLLLA 444