Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., outer membrane efflux protein from Bacteroides ovatus ATCC 8483

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 65/301 (21%), Positives = 131/301 (43%), Gaps = 18/301 (5%)

Query: 133 PIFTGGRITAAQDAAAGKEEEAQSQLAMEI---QARYEDLAKYYFSVVLAKEVLATRIAV 189
           P++TGG + A    A  K +E  +QL  E+   Q  Y+  A  Y++   ++ +L      
Sbjct: 102 PLYTGGALNAQHKIA--KADERLNQLNEELTIDQIHYQSDA-VYWNASASQAMLQAADKY 158

Query: 190 EEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILGAT 249
           +  + Q  D        G I+  + L     L +A+++  KA++   +A   L  ++G  
Sbjct: 159 QSIVKQQYDIIQDRFNDGMISRTDLLMISTRLKEAELQYIKARQNYTLALQKLNILMGED 218

Query: 250 ETVEPSGMLFINTSLPPMHAF-IEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYL 308
                  +  I+T+  P+    +E  L         +    +  +  KA   ++ P++ +
Sbjct: 219 PNNPVDSLYTIDTASAPVQILSLENVLQRRADYESTEVNIMKGQAQRKAALSQFNPQLNM 278

Query: 309 Y--GDYSLHEDDSLASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVN----QVRYLK 362
           Y  G ++     +L   +  + +VG+ +NIP+     R +  +   + +     Q  Y+ 
Sbjct: 279 YFSGGWAT-ATPNLGYDVSFNPIVGINLNIPIFRWGARFKTNRQQKAYIGIQKLQQSYVT 337

Query: 363 AQAKQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAE 422
               ++LS  + K   E E    +V     +++LA ENL L   ++++G +  VDV+ A+
Sbjct: 338 DNINEELSAALTK-LTETEY---QVKTAKETMSLANENLDLVSFSYNEGKANMVDVLSAQ 393

Query: 423 L 423
           L
Sbjct: 394 L 394