Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Outer membrane protein TolC from Acinetobacter radioresistens SK82

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 102/440 (23%), Positives = 193/440 (43%), Gaps = 51/440 (11%)

Query: 34  QQQNNSLAAQRANVERYA----HLKDATQNLNLPSVSVGANFTRLDQDVTLSGKQIVDSA 89
           Q+   S  + +AN+ +Y     +L  A  N  LP+VSV  N TR  Q    S    +   
Sbjct: 28  QRAKQSDPSWQANLYQYQADQLNLGIARTNF-LPTVSVSGNITRKHQGSNQSNSVTIPGF 86

Query: 90  GGIDPNLIASLSPSLLPLVTHLGAAKSTITERDIFTSSIRAIWPIFTGGRITAAQDAAAG 149
                 L++S S                 T + I   SI A  P+F        +DA  G
Sbjct: 87  ENFGDALMSSTS-----------------TTKQI---SITARQPLFR-------KDAWEG 119

Query: 150 KEEEAQSQLAMEIQARYE------DLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKL 203
            ++   S L  E+Q R        ++A+ YF+V+  + + ++ +  E+ L +  +     
Sbjct: 120 YKQVQTSVLLSEVQLRQRQQDHILNVAESYFNVLRQQTLTSSHLQEEKALLEQLEMMNAK 179

Query: 204 EQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILGATETVEPSGMLFINTS 263
            ++G +A  +  +A+A    A+  R  +   L +AQ  L Q++G  +  E   +L  N S
Sbjct: 180 LREGLVARSDVSEANAQYQNARANRISSNVQLLLAQEQLAQLIGPYQ--ESLAVLQENFS 237

Query: 264 LP-PMHAFIEQ--TLNTYPGLSLLDAK--EKQASSLIKAEQGKYYPE---VYLYGDYSLH 315
              P  A +++  TL     LS+  A+  +K      + E+   YP+   V  YG Y+  
Sbjct: 238 YQQPYPANLQEWTTLAQNQNLSVQQARLQQKYNDDQRRIERAALYPQLEAVATYG-YTKQ 296

Query: 316 EDDSLASQMKPDWLVGVGVNIPLIENSGRSEQ-VKAANSAVNQVRYLKAQAKQDLSVLVE 374
             ++L S       +GV +N  L  N GR++Q ++ A   + +       A +  +   +
Sbjct: 297 SPETLISGDGQFDQIGVEMNWNLF-NGGRTQQNIRKATVDIRRAEAELEAAVRKSTTDAK 355

Query: 375 KTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSL 434
           + YL+ +    ++    +++  ++   R  +  +++GL T VDV+ A+    S R     
Sbjct: 356 QAYLQVQTDQNKLEARKAAMQSSELVSRASRAQYNEGLKTIVDVLLAQRNAFSARQDYVN 415

Query: 435 ASFNYLISLNKLLALSSEMS 454
           A +++LI++ +L A + +++
Sbjct: 416 AQYDHLINILRLKAAAGQLN 435