Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 68.2 bits (165), Expect = 6e-16
 Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 62/358 (17%)

Query: 207 EEIA---RLYVELDVTMSTLKEGIISIDDKGILRSINKSACEILGLRREQALNRRLTT-- 261
           EE+A   RL   L   +S L  G+I ID++G +R  N +AC++LGL  E  L R + T  
Sbjct: 69  EELAEKERLANRLQNLLSLLPGGVIVIDEEGRVREANPAACDMLGLPLEGELWRHVITRC 128

Query: 262 ILPESDLYTVLATGRTDHDIELYLNKHWIIANRSPIVVEGKVVGAVSSFRLRD--EINEL 319
             P  D           H+I L   +   IA RS     G++V       L D  E   L
Sbjct: 129 FAPRED---------DGHEISLKDGRRLSIATRSLDAEPGQLV------LLNDLTETRHL 173

Query: 320 TEQLAQTREYA---EMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETEHY----QV 372
            +QLA+    +    M+ S  H+ R  L+  + L+    L   +QL G   + +    + 
Sbjct: 174 QDQLARHERLSSLGRMVASLAHQIRTPLS--AALIYASHL-TDEQLPGATHQRFAGRLKE 230

Query: 373 LIEFLRETIKDPLI-AGMLLGKTERARELGLELMVEDGARLETLPIHIK----------- 420
            +  L   ++D L+ A   L  T+R    GL   ++  A      + ++           
Sbjct: 231 RLHELEHQVRDMLVFARGELPLTDRITPAGLMQALQAAAAPHIQDVQVRWQCDSHLGELL 290

Query: 421 --AEDVVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGL 478
              + +V  L NLI+NA +A+    R           ++V + + G  + L + D G G+
Sbjct: 291 CNRDTLVGSLLNLIENATQASGPGAR-----------LKVHLYNRGQNLRLCISDSGSGI 339

Query: 479 -PKELEHWQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK-AQGTRMTVYLP 534
            P  L+  +L E   ++K     G+GL +VK +A  +QG+L +HS+  +GT   + LP
Sbjct: 340 EPAVLQ--RLGEPFFTTK-TNGTGLGLTVVKAVARAHQGELQLHSRVGRGTCALMTLP 394