Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score = 55.1 bits (131), Expect = 6e-12
 Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 41/238 (17%)

Query: 312 LRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETEHYQ 371
           + D  +EL   LA  R   E L+ Q+ +   +   +  LL+    D   +L+GQ      
Sbjct: 251 IADAAHELRTPLAAMRVNVEALKEQSTDEGQR-ELMGNLLRSN--DRAARLVGQ------ 301

Query: 372 VLIEFLR-ETIKDPLIAGML------------LGKTERARELGLELMVEDGARLETLPIH 418
            L++ +R + + D  +  ML            +     AR + LEL+ ED      +P+ 
Sbjct: 302 -LLQLMRSDAVSDNALPVMLSLDGLVQDRLAMIEGLASARGIELELVCED-----RVPVL 355

Query: 419 IKAEDVVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGL 478
            + E +V+++ NL++NA + +           P    + V ++  G   +L V DQG G+
Sbjct: 356 GERESLVSMIDNLVNNAIKYS-----------PSGSTVVVHVAHEGPHALLTVADQGPGI 404

Query: 479 PKELEHWQLTEKGVSSKAVQN-RGVGLFLVKQLADRYQGQLDMHSKAQ-GTRMTVYLP 534
           P  L          +    Q+  G+GL +VK + DR+ G++ +   A+ G  +TV LP
Sbjct: 405 PAALRERVFDRFFRNPDQTQSGSGLGLAIVKSVIDRHGGEVTLGETAEGGLLVTVRLP 462