Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1214 a.a., Virulence sensor protein BvgS from Pseudomonas sp. DMC3

 Score = 55.8 bits (133), Expect = 9e-12
 Identities = 85/369 (23%), Positives = 147/369 (39%), Gaps = 79/369 (21%)

Query: 231 DDKGILRSINKSACEILGLRREQ---------ALNRRLTTILPESDLYTVLATGRTDHDI 281
           D +G+L+S N S  E    RRE           L+        ++D   V+A G     I
Sbjct: 598 DRQGLLQSCNDSYLEAFNARREDIIGKGVMQGTLSNACEAEAFQADYQRVIAEG-----I 652

Query: 282 ELYLNK------------HWIIANRSPIVVEGKVVGAVSSFRLRDEINELTEQLAQTREY 329
            L L++            HWI+  R      G V G +  +    E  +L E+L   +E 
Sbjct: 653 PLILDRPLHIGSRRLTIYHWILPYRDS---SGDVQGIIGGWIDISERRQLFEKLRAAKEQ 709

Query: 330 AE--------MLRSQTHEHRNKLNTISGLLQM--------------------------GE 355
           A+         L + +HE R  +N + G+L++                          G 
Sbjct: 710 ADEANRAKSTFLATMSHEIRTPMNAVIGMLELTLRRIDPQHPDRASIDTAYHSAKDLLGL 769

Query: 356 LDAVQQLIGQETEHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETL 415
           +  +  +   E+    +  E++        +A +  G    AR+  L L V        +
Sbjct: 770 IGDILDIARIESGRLSLSPEWINLVDTVTSVARIFDGL---ARQKNLALQVLFNPPHPAV 826

Query: 416 PIHIKAEDVVTILGNLIDNAFEATLTA-IR-TLSPVPPE---RRVIEVSISDFGNEIILE 470
            +H+       +L NL+ NA + T +  +R TL  +P +   R ++++++ D G+ I  E
Sbjct: 827 DVHLDPLRFKQVLSNLVSNAIKFTESGHVRITLDLIPADAAGRTLMQLTVQDSGSGISAE 886

Query: 471 VDDQGCGLPKELEHWQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK-AQGTRM 529
            D Q     +  E +   E G S +A    G+GL + + L +   GQL + S+   GT++
Sbjct: 887 -DQQ-----RLFEPFSQAENG-SRQAKNGAGLGLVISRNLCEMMGGQLQLSSQPGIGTQV 939

Query: 530 TVYLPKDEL 538
            + LP D L
Sbjct: 940 CISLPLDSL 948