Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., sensor histidine kinase from Pantoea agglomerans CFBP13505 P0401

 Score =  209 bits (533), Expect = 2e-58
 Identities = 164/540 (30%), Positives = 268/540 (49%), Gaps = 25/540 (4%)

Query: 1   MVWSSITFRKRMLIIMTLSGLIELLLLVAAGFMYVKHSQEQEVGQKALGVAAFLAQTPAV 60
           M  S++T      +I+T+   + LL      F+ + +  +  +  KA+ VA  LA +P V
Sbjct: 16  MKLSTLTTLMMTAVIVTVLLAVHLLY-----FVQIDNFAQSHLKDKAMAVARTLADSPEV 70

Query: 61  INMIKTGRASDDQQQSYRELTQLIGAAFIVIGDNQGIRLVHPIDERIGKPMVGGDNERAL 120
              +     S   Q       +  G  F+V+ D +GIR  HP    IGK  VG D   AL
Sbjct: 71  QRGLLLPDGSSQIQPLAEAARKRNGLLFVVVTDMRGIRFSHPNAAVIGKHFVGNDIYPAL 130

Query: 121 VEGEAYVSFAQGSLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATAL 180
             G   V+   G L +++R    V +   Q IGVV++G  +  +  ++    + ++ T L
Sbjct: 131 -SGRENVAVNHGVLVEALRVFTPVYNAEHQQIGVVAIGIALNDVAAQIAKSRWNIVWTVL 189

Query: 181 LVVGANALVSSYASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSIN 240
                  L      RR +  +LG EP EI+ L+ +    ++++KEG+I++DD+  +  IN
Sbjct: 190 FGGLVGLLGILILVRRLKSILLGLEPHEISSLFEQRQAILNSIKEGVIAVDDESRVSLIN 249

Query: 241 KSACEILG-LRREQALNRRLTTILPESDLYT----VLATGRTDHDIELYLNKHWIIANRS 295
            +A ++L    R+  L+  L  I  ES ++      L  G+  HD EL L    +I+N  
Sbjct: 250 HAAQQLLHETTRKMPLSGDL--IAEESVMHRHQQDALHAGKAWHDQELTLGNRILISNTV 307

Query: 296 PIVVEGKVVGAVSSFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGE 355
           P+    +++GAV++FR + EI++L ++L     Y + LR ++HE  NKL+ I GLL M  
Sbjct: 308 PVRSRDRIIGAVTTFRDKTEISQLMQRLDGMVNYVDALRERSHEFMNKLHVILGLLHMKN 367

Query: 356 LDAVQQLIGQETEHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETL 415
              +++ I +    YQ  I  L + IK P+IAG LL K  R  + G +L++++ + L   
Sbjct: 368 YAQMEEYILKTANAYQTEIGSLLQKIKSPIIAGFLLSKINRVTDEGHQLIIDEASFLPDC 427

Query: 416 PIHIKAEDVVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQG 475
               ++  ++T+LGNLI+NA EA           P     I + +      +  EV D G
Sbjct: 428 GSEEQSAVLITVLGNLIENALEAL---------DPETEGEIHLMLHYQNGWLACEVSDDG 478

Query: 476 CGLPKELEHWQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK-AQGTRMTVYLP 534
            G+    +   + E+GVSSK  ++RGVGLFLVKQ  +   G + + S+    T+  V LP
Sbjct: 479 PGI-DATQLSAIFERGVSSKG-EDRGVGLFLVKQQTESLGGSVSVESEPGVFTQFLVQLP 536