Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 744 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score = 59.3 bits (142), Expect = 5e-13
 Identities = 80/355 (22%), Positives = 154/355 (43%), Gaps = 50/355 (14%)

Query: 217 DVTMSTLKEGIISIDDKGILRSINKSACEILGLRREQALNRRLTTILPESDLYTVLATGR 276
           +  ++ +  G+I +D  G +   N+SA E++G+  +  + + +  ++PE       A  R
Sbjct: 390 ETVLAGVSSGVIGLDAAGRIHLPNRSAGELIGINLDDNVGQDIRDVIPELSESLDEAIRR 449

Query: 277 TDHDIELYLNKHWIIANRSPIVV--------EGKVVGAVSSFRLRDEINELTEQLAQTRE 328
            +  ++  +        RS I++        E +++G V +F   D+I EL     +T  
Sbjct: 450 PEKLVQREVRLS-TAGGRSRILLVRVAAERLESEIIGYVVTF---DDITELVSA-QRTAA 504

Query: 329 YAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETEHYQVLIEFLRETIKD----- 383
           +A++ R   HE +N L  I    +  +   +++ I  + E Y  L+E +   + D     
Sbjct: 505 WADVARRIAHEIKNPLTPIQLSAERLKRKYLKE-IQSDPETYVNLVETIVRQVGDIGRMV 563

Query: 384 -----------PLIAGMLLGKT-------ERARELGLELM--VEDGARLETLPIHIKAED 423
                      P I    L          +R    G+E +  + DG     +P+   +  
Sbjct: 564 DEFSSFARMPAPQIKPDDLNDICRQAMFLQRTGNPGVEFVHHLPDGK----VPVLCDSRL 619

Query: 424 VVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGLPKELE 483
           +   L NL+ NA EA    I+        R  I +S+    + +++ V+D G GLP E  
Sbjct: 620 IGQALTNLLKNAVEA----IQGRDDPEAPRGRIALSLVSHSDRLVVTVEDNGKGLPTE-N 674

Query: 484 HWQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMH-SKAQGTRMTVYLPKDE 537
             +LTE  V+++  +  G+GL +VK++ + + G L +  +   G R+ +  P  E
Sbjct: 675 RERLTEPYVTTR-TKGTGLGLAIVKKIMEDHGGDLYLEDAPGGGARIGLVFPSSE 728