Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Sensor histidine kinase DcuS from Escherichia coli ECRC101

 Score =  220 bits (560), Expect = 1e-61
 Identities = 161/535 (30%), Positives = 276/535 (51%), Gaps = 29/535 (5%)

Query: 13  LIIMTLSGLIELLLLV-AAGFMYVKHSQEQEVGQKALGVAAFLAQTPAVINMIKTGRASD 71
           +I+M  + L  +LL+V    F  +       +  KAL VA  LA +P     I+ G    
Sbjct: 21  VILMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAVARTLADSPE----IRQGLQKK 76

Query: 72  DQQQSYRELTQLI----GAAFIVIGDNQGIRLVHPIDERIGKPMVGGDNERALVEGEAYV 127
            Q+   + + + +       FIV+ D Q +R  HP  +RIG+P  G D  +AL  GE  V
Sbjct: 77  PQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKAL-NGEENV 135

Query: 128 SFAQGSLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATALLVVGANA 187
           +  +G L +++R    + D++ + IGVV++G  + R+  ++    + +I + L  +    
Sbjct: 136 AINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGL 195

Query: 188 LVSSYASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSINKSACEIL 247
           + +    +  ++ + G EP EI+ L+ +    + ++KEG++++DD+G +  IN +A E+L
Sbjct: 196 IGTCILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELL 255

Query: 248 GLRREQALNRRLTTILPE----SDLYTVLATGRTDHDIELYLNKHWIIANRSPIVVEGKV 303
             R+ Q  + +L+T+        D+  VL  G    D E+ +    ++ N  P+   G +
Sbjct: 256 NYRKSQD-DEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVI 314

Query: 304 VGAVSSFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLI 363
           +GA+S+FR + E+ +L ++L     YA+ LR ++HE  NKL+ I GLL +     ++  I
Sbjct: 315 IGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYI 374

Query: 364 GQETEHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETLPIHIKAED 423
            +   +YQ  I  L   IK P+IAG L+ K  RA +LG  L++   ++L       +   
Sbjct: 375 LKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSESQLPDSGSEDQVAT 434

Query: 424 VVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGL-PKEL 482
           ++T LGNLI+NA EA       L P P     I V++      +  EV+D G G+ P ++
Sbjct: 435 LITTLGNLIENALEA-------LGPEPGGE--ISVTLHYRHGWLHCEVNDDGPGIAPDKI 485

Query: 483 EHWQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK-AQGTRMTVYLPKD 536
           +H  + +KGVS+K    RGVGL LVKQ  +   G + + S+    T+  V +P D
Sbjct: 486 DH--IFDKGVSTKG-SERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWD 537