Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Sensor histidine kinase DcuS from Escherichia coli ECOR38

 Score =  218 bits (556), Expect = 4e-61
 Identities = 159/531 (29%), Positives = 273/531 (51%), Gaps = 21/531 (3%)

Query: 13  LIIMTLSGLIELLLLV-AAGFMYVKHSQEQEVGQKALGVAAFLAQTPAVINMIKTGRASD 71
           +I+M  + L  +LL+V    F  +       +  KAL VA  LA +P +   ++      
Sbjct: 21  VILMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAVARTLADSPEIRQGLQKKPHES 80

Query: 72  DQQQSYRELTQLIGAAFIVIGDNQGIRLVHPIDERIGKPMVGGDNERALVEGEAYVSFAQ 131
             Q     + +     FIV+ D Q +R  HP  +RIG+P  G D  +AL  GE  V+  +
Sbjct: 81  GIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKAL-NGEENVAINR 139

Query: 132 GSLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATALLVVGANALVSS 191
           G L +++R    + D++ + IGVV++G  + R+  ++    + +I + L  +    + + 
Sbjct: 140 GFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTC 199

Query: 192 YASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSINKSACEILGLRR 251
              +  ++ + G EP EI+ L+ +    + ++KEG++++DD+G +  IN +A E+L  R+
Sbjct: 200 ILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRK 259

Query: 252 EQALNRRLTTILPE----SDLYTVLATGRTDHDIELYLNKHWIIANRSPIVVEGKVVGAV 307
            Q  + +L+T+        D+  VL  G    D E+ +    ++ N  P+   G ++GA+
Sbjct: 260 SQD-DEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAI 318

Query: 308 SSFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQET 367
           S+FR + E+ +L ++L     YA+ LR ++HE  NKL+ I GLL +     ++  I +  
Sbjct: 319 STFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYILKTA 378

Query: 368 EHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETLPIHIKAEDVVTI 427
            +YQ  I  L   IK P+IAG L+ K  RA +LG  L++   ++L       +   ++T 
Sbjct: 379 NNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSESQLPDSGSEDQVATLITT 438

Query: 428 LGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGL-PKELEHWQ 486
           LGNLI+NA EA       L P P     I V++      +  EV+D G G+ P +++H  
Sbjct: 439 LGNLIENALEA-------LGPEPGGE--ISVTLHYRHGWLHCEVNDDGPGIAPDKIDH-- 487

Query: 487 LTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK-AQGTRMTVYLPKD 536
           + +KGVS+K    RGVGL LVKQ  +   G + + S+    T+  V +P D
Sbjct: 488 IFDKGVSTKG-SERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWD 537