Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., two-component system sensor histidine kinase DcuS from Dickeya dadantii 3937

 Score =  215 bits (548), Expect = 3e-60
 Identities = 146/515 (28%), Positives = 268/515 (52%), Gaps = 17/515 (3%)

Query: 14  IIMTLSGLIELLLLVAAGFMYVKHSQ--EQEVGQKALGVAAFLAQTPAVINMIKTGRASD 71
           II+ +S +I  +LLV    ++ + ++  E  +  KA  +A  +A +P V++ +K      
Sbjct: 14  IILMVSAVIGSVLLVVYALLFFRITELTETHLKDKAFAIARTVANSPIVVDDLKGIGDPM 73

Query: 72  DQQQSYRELTQLIGAAFIVIGDNQGIRLVHPIDERIGKPMVGGDNERALVEGEAYVSFAQ 131
             Q+   ++       F+++ D  GIR  HP   +IG+  +G D   AL+ G    +  +
Sbjct: 74  LVQRFSEDVKSRNHLLFVIVTDMDGIRHSHPEPGQIGRHFIGDDLYPALL-GLENTAVNR 132

Query: 132 GSLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATALLVVGANALVSS 191
           G L  ++R    V D++ Q +GVV+VG  +  +Q  +    + +  T L       L + 
Sbjct: 133 GVLDPALRVFTPVFDKNNQQLGVVAVGISLSSVQSVINENRWIIPWTILFGALVGLLGTY 192

Query: 192 YASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSINKSACEIL---G 248
           +  +  +R +LGFEP EI+ L+ + +  +  +KEG+I++D    +  IN  A  +    G
Sbjct: 193 FLVKTLKRIMLGFEPFEISNLFEQRNAMLKQIKEGVIAVDTDLRVTIINDEAKRLFSQHG 252

Query: 249 LRREQALNRRLTTILPESDLYTVLATGRTDHDIELYLNKHWIIANRSPIVVEGKVVGAVS 308
                A+   ++      +L  VL TG    D E+  N + ++ N  P+VV+G ++G ++
Sbjct: 253 SGETLAIGSTISRWPALMNLEKVLETGAPRQDEEINFNGNLLLINTVPVVVKGDIIGTIA 312

Query: 309 SFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETE 368
           +FR + E+++L ++L     YA+ LR+Q+HE  NKL+ I G+L +     +++ I +   
Sbjct: 313 TFRDKTEVSQLLQRLTGMSYYADALRAQSHEFMNKLHVILGMLHLKYYPQLEEYILKTAN 372

Query: 369 HYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETLPIHIKAEDVVTIL 428
           +YQ  I  +   +K P+IAG LLGK  RAR+LG+ L + + + L          +++T+L
Sbjct: 373 NYQAEIGSIIRKVKSPVIAGFLLGKINRARDLGVTLSISEDSLLPDTDDAQATNELITVL 432

Query: 429 GNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGLPKELEHWQLT 488
           GNLI+NA +A L+ +        E R I V+      ++   V D G G+  +++  ++ 
Sbjct: 433 GNLIENAMDA-LSGL--------ENREISVTFHHQDGQLHCTVSDDGPGIAPDIQQ-RIY 482

Query: 489 EKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSK 523
           ++G S+K    RG+GL+L +Q  ++  G +D  S+
Sbjct: 483 QEGFSTKG-SGRGIGLYLTRQSLEKIGGTIDFESE 516