Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., sensory histidine kinase in two-component regulatory system with CitB from Escherichia coli BL21

 Score =  296 bits (758), Expect = 1e-84
 Identities = 178/531 (33%), Positives = 301/531 (56%), Gaps = 34/531 (6%)

Query: 21  LIELLLLVAAGFMYVKHSQEQ----EVGQKALGVAAFLAQTPAVINMIKTGRASDDQQQS 76
           L+  + ++AA   Y   S E      V   A+  A  +A   +VI+ +KT        + 
Sbjct: 27  LVFSIFVIAALAQYFTASFEDYLTLHVRDMAMNQAKIIASNDSVISAVKT--------RD 78

Query: 77  YRELTQLIGAA-------FIVIGDNQGIRLVHPIDERIGKPMVGGDNERALVEGEAYVSF 129
           Y+ L  +           ++VIGD   IRL HP  E+IG PM     + AL +GE+Y   
Sbjct: 79  YKRLATIANKLQRDTDFDYVVIGDRHSIRLYHPNPEKIGYPMQF-TKQGALEKGESYFIT 137

Query: 130 AQGSLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATALLVVGANALV 189
            +GS+G ++R K  + D  G++IGVVS+GYL+ ++      FL  +    ++++G   L+
Sbjct: 138 GKGSMGMAMRAKTPIFDDDGKVIGVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLL 197

Query: 190 SSYASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSINKSACEILGL 249
           S + +   +R ++G EP++IAR+  + +   S++ EG+I +D  G + +IN++A ++LGL
Sbjct: 198 SWFLAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIEVDPHGYITAINRNARKMLGL 257

Query: 250 RR--EQALNRRLTTILPESDLYTVLATGRTDHDIELYLNKHWIIANRSPIVVEGKVVGAV 307
                Q L + +  ++  +D +T     +   D+    N   +IANR  I     ++GA+
Sbjct: 258 SSPGRQWLGKPIAEVVRPADFFTEQIDEKRQ-DVVANFNGLSVIANREAIRSGDDLLGAI 316

Query: 308 SSFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQET 367
            SFR +DEI+ L  QL Q ++Y E LR+  HEH N ++T++GLLQM E D V  ++  E+
Sbjct: 317 ISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGES 376

Query: 368 EHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETLPIHIKAEDVVTI 427
           +  Q LI+ LRE   D  +AG+L GK +RARELGL++++  G++L  LP  + + +   I
Sbjct: 377 QAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAI 436

Query: 428 LGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGLPKELEHWQL 487
           +GNL+DNAFEA+L +           +++E+ +SD G+++++EV DQGCG+P+ L   ++
Sbjct: 437 VGNLLDNAFEASLRS-------DEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRD-KI 488

Query: 488 TEKGVSSKAVQ--NRGVGLFLVKQLADRYQGQLDMHSKAQ-GTRMTVYLPK 535
            E+GVS++A +    G+GL+L+     R  G + +      GT  ++Y+PK
Sbjct: 489 FEQGVSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPK 539