Pairwise Alignments

Query, 228 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA-binding response regulator in two-component regulatory system with DcuS (NCBI) from Escherichia coli BW25113

 Score =  128 bits (322), Expect = 8e-35
 Identities = 81/235 (34%), Positives = 131/235 (55%), Gaps = 17/235 (7%)

Query: 5   LLIIEDDAAIAQLHHRYLSQLEGFEVVGIAMSQADARLQMEVL----NP-DLVLLDVYLP 59
           +LII+DDA +A+L+ RY++Q+ GF+  G A +   A+   E++     P DL+LLD+Y+ 
Sbjct: 4   VLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAK---EIIFNSDTPIDLILLDIYMQ 60

Query: 60  DGTGLELLQWIRGRNVHCDVILITAAREVETLQQAMRGGVVDYLLKPVMFPRLETALRKY 119
              GL+LL  +       DVI+I++A +  T++ ++  GVVDYL+KP    R E AL  +
Sbjct: 61  KENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGW 120

Query: 120 QMRQAELKQLADFDQQKVDKMF-TTHSSEALPQRLPKGIDAVTLDKIRLLFQTATM---- 174
           + ++  L++   +DQ ++D++   + S+E  P+RLPKG+   TL   R L Q        
Sbjct: 121 RQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTL---RTLCQWIDAHQDY 177

Query: 175 -LTADEAGEKIGASRTTARRYLEYLITAGELEADLSYGTVGRPERTYRKLHRHTS 228
             + DE   ++  SR + R+YL +L+    L   + YG  GRP   YR    H S
Sbjct: 178 EFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYS 232