Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Cystine ABC transporter, periplasmic cystine-binding protein FliY from Pseudomonas fluorescens GW456-L13

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 23/204 (11%)

Query: 38  YPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALLKQ---DGVL 94
           YPP +F   DGK AG  V+     A  + V + L     QP       A L+    D V+
Sbjct: 50  YPPFSFVDADGKLAGFEVEFSEALAKELGVKVKL-----QPTKWDGILAALESKRLDAVI 104

Query: 95  FSTTRTTHRENLFNWVGP--IADIKVVVLARKSSQIKVNDPIELGNYRIGVIRDDIGE-- 150
              T +  R+  +++  P  ++ I+ +VL +K +++ +    +L   ++GV    +G   
Sbjct: 105 NQVTISEERKKKYDFSEPYTVSGIQALVLTKKVAELNIKSAADLSGKKVGV---GLGTNY 161

Query: 151 QQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQ--------DSYPV 202
           +Q ++  VP+  +       +  + L   RID +  D   AL +  +        D++  
Sbjct: 162 EQWVKENVPKADVRTYEDDPTKFQDLRVGRIDAILIDRLAALEYAKKAKDTTAAGDAFSR 221

Query: 203 EEFETVYVLMQGSLYYAFNKNIDK 226
           +E        +  L  A NK IDK
Sbjct: 222 QEAGIALRKGEPELLAAVNKAIDK 245