Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 85.1 bits (209), Expect = 1e-21
 Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 13/232 (5%)

Query: 15  LSFSPSVKVQAQGLESLTYYTENYPPLNFAKEDGKPA------GIAVDLLLEAAAAVNVT 68
           L  + S + +     SL   TEN+PP N AK     A      GIAVD++ E      + 
Sbjct: 14  LLLAGSARAEEPSDASLVLLTENFPPYNMAKNGKNFAKEENIEGIAVDIVRETFKRAGIA 73

Query: 69  LNLDQIFVQPWPRSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQI 128
            NL   F  PW R Y+ AL K    +F   R   RE LF WVGPI     V+LA+  S+I
Sbjct: 74  YNLTLRF--PWERIYKLALEKPGYGVFVMARLPDREALFKWVGPIGPDDWVLLAKADSKI 131

Query: 129 KVNDPIELGNYRIGVIRDDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDE 188
           ++        YRIG  + D   + L + G+    ++        A++L+  +IDL A  +
Sbjct: 132 QLAHLEHARPYRIGAYKGDAIAESLEKQGLKPIVVLRD---QDNAQKLMDGQIDLWATGD 188

Query: 189 RTALWWMSQDSYPVEEFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIELIK 240
               +   Q    V   +TV       LY A NK++   ++  LQ  ++ ++
Sbjct: 189 PAGRYLARQ--VGVTGLKTVLRFNSAQLYLALNKDVPDELVAKLQAALDQLR 238