Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 4/161 (2%)

Query: 37  NYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALLKQDGVLFS 96
           ++PP  F  ++G+  G+A D +      + VT     +    W      A   +  +L  
Sbjct: 45  SWPPFEFRDQEGRYQGLAADYIAMIQQRLGVTFK--PVEPSSWTEVLAQARESRIDLLPG 102

Query: 97  TTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRIGVIRDDIGEQQLLQL 156
              T  R+    +  P  D  +V+LA K    +     +L   +I V+ ++    +LL+ 
Sbjct: 103 IMSTPERQGFLAFTRPYLDFPIVILAHKGGA-QPRKLADLYGLKIAVV-ENYAPHELLRT 160

Query: 157 GVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQ 197
             P  ++V    VSS  + L   ++D +  D  +++W + Q
Sbjct: 161 HHPDLNLVALPNVSSTLQALATDQVDAVVGDLASSIWSLRQ 201