Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 6/216 (2%)

Query: 29  ESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALL 88
           ES    TE + P N+  E+ +  G+  +++    A + +T +   I V P  RS R    
Sbjct: 22  ESYLVVTEEWAPYNYL-ENNQLTGMTTEIV---RAIMTLTADDFPIEVLPSMRSSRVLKT 77

Query: 89  KQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGNYRIGVIRDDI 148
           +   +L+S  RT  RE L+ WVGPI +  +      S+Q  VN   +L        R+  
Sbjct: 78  RPKTILYSMFRTAEREPLYKWVGPIVEESIYPYQLASAQQPVNTLEQLLQAPQITTRNAG 137

Query: 149 GEQQLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTAL-WWMSQDSYPVEEFET 207
              ++LQ    R      +    L   LL  R +++  D    + ++  Q   P      
Sbjct: 138 LIPEVLQSRGFRNLDKSATGSLQLYRMLLAGRTEIIVGDTPAGMAYYSRQLKIPPGLLRQ 197

Query: 208 VYV-LMQGSLYYAFNKNIDKSVLNDLQKGIELIKNS 242
           V V L + SLY AF+++ D SV+    + +E ++ S
Sbjct: 198 VPVELYRSSLYIAFSRDSDDSVVAAWARALEQLRRS 233