Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score = 79.3 bits (194), Expect = 7e-20
 Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%)

Query: 10  VLGVVLSFSPSVKVQAQGLESLTYYTENYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTL 69
           +L  V + SP+   +A     L   TE  PP N   +DG+  G++ +++      + V  
Sbjct: 15  MLMAVGALSPNAAAEAP----LRIVTEELPPYNMT-QDGRVTGMSTEVVQAVLKEIGVEA 69

Query: 70  NLDQIFVQPWPRSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIK 129
               I V PW R+Y  AL + + +++S +RT  RE LF+WVG IA  +  + +     +K
Sbjct: 70  ---PIHVMPWARAYELALNEGNVLIYSISRTPAREPLFHWVGAIAPTRWFLYSLAERPVK 126

Query: 130 VNDPIELGNYRIGVIRDDIGEQQLLQLGVPRESMVEGSTVSSLAEQLLK-KRIDLLAYDE 188
           ++   +  +Y+I  +  D+GEQ L+  G      ++ ST      + LK   +++   +E
Sbjct: 127 LSSLDDARHYQIATVNQDVGEQYLIAKGFRIGEQLQSSTKYEHNYRKLKVDHVEMWISNE 186

Query: 189 RTALWWMSQD----------SYPVEEFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIEL 238
             A +   Q+          S P+ +  +     +  L  AF++      +   + G+E 
Sbjct: 187 LNAQYLARQNGEDPAKVLIRSLPIPDLSS-----EEGLSMAFSRKTPAETVEKFRAGLE- 240

Query: 239 IKNSVNENGVTRYQAILDKY 258
              ++  NGV  Y AIL K+
Sbjct: 241 ---AIQRNGV--YDAILRKW 255