Pairwise Alignments

Query, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 17/228 (7%)

Query: 37  NYPPLNFAKEDGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQPWPRSYRSALLKQDGVLFS 96
           ++PPL +  + GKPAGIA D++ EA  A    + ++   + PW R+  +        +F+
Sbjct: 35  SFPPLIY-DDGGKPAGIAYDIVTEAMKAAGHAVTVE---IMPWARALDTVREGGADAVFT 90

Query: 97  TTRTTHRENLFNWVGPIADIKVVVL-ARKSSQIKVN-DPIELGNYRIGVIRD-DIGE--Q 151
             +T  RE   N+   +   +VV L   K S +  + D  +L + + GV+     G    
Sbjct: 91  AYKTPEREQFLNYSNQVLVPQVVSLFVAKDSPVSFDGDLSKLADRKFGVVNQISYGSIVD 150

Query: 152 QLLQLGVPRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQDSYPVEEFETVYVL 211
             ++ GV   ++ + +   S  ++L+  R +++  +   A +++ Q     +  E    +
Sbjct: 151 DAIKTGV-LPAVEKSNDSDSNVKKLVSGRFEVMPSNRYVAQYFLKQAGALDKVKELTPAV 209

Query: 212 MQGSLYYAFNKNIDKSVLND-LQKGIELIKNSVNENGVTRYQAILDKY 258
                Y AF K  D + L D    G+  +K S        YQ ILDKY
Sbjct: 210 QDIPSYIAFTKARDTAKLRDEFDAGVAAMKAS------GAYQQILDKY 251