Pairwise Alignments

Query, 328 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 4e-28
 Identities = 83/282 (29%), Positives = 134/282 (47%), Gaps = 21/282 (7%)

Query: 43  INVAKVREVIRVPETTDYPNAQPHMIGVFSSREILTPLVDLAGWLGVPTSTDISKKYVIV 102
           IN+ KV E+I  P     P + PH+ G+ + R     ++DL+  LG     D     +IV
Sbjct: 26  INLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLSRALGEMPLADPDGGCLIV 85

Query: 103 TDFNRMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRQDKKLIMILDFEKI 162
           TD +R   G  + ++S+I      D+  P  +   G +  +  V + +  L+ +LD EK+
Sbjct: 86  TDVSRSKQGLHVQAVSKIVHCLTTDIR-PPPYGSGGNRAFITGVTQVEGGLVQVLDIEKV 144

Query: 163 ISDINP-ELSMEKYDVTVDRKVDLNQRMVTKRNAKTIMVVDDSAFIRSLIQDTLSSAGYN 221
           I  I P  +     D+T++    L        NA+ I+VVDDS         TL + G  
Sbjct: 145 IHGIAPAPIEAAPTDLTMEEAEVLG-------NAR-ILVVDDSQVALQQSVHTLRNLGLT 196

Query: 222 IIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVVTDVEMPRMDGMHLIKRLRDDDSYS 281
               +   EA + L+EL+   ++ NV        VV+D+EM  MDG  L + LR+   + 
Sbjct: 197 CHTARSAKEAIDVLLELQGTVEQINV--------VVSDIEMSEMDGYALTRTLRETPDFQ 248

Query: 282 SMPIVMFSSLMSDDNRAKALALGANDTLTK---PEIGKMVAM 320
            + +++ +SL S  N  KA   GA+  LTK   PE+ K + +
Sbjct: 249 HLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPELTKCLVV 290