Pairwise Alignments

Query, 267 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Bacterial extracellular solute-binding proteins, family 3 from Alteromonas macleodii MIT1002

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 14/240 (5%)

Query: 33  NGHAYYHELLARALADQGISL----VVETPYTHLPQKRVVKMV-ENNQLSLTWLLETPER 87
           + HAYY  LL  AL+     +    +VE+   +L Q+RV++ + +   + + W + +  R
Sbjct: 58  DSHAYYSALLKLALSKTEDPIKPTYLVESS-GNLVQERVLRQLNQEGGVDVFWTVTSKLR 116

Query: 88  NKKFVHVDVPLTNGLIGQRILLIPPSLQSRLDKVSNLNEFRQTRLVAGLGEGWLDIAVWR 147
            ++ + V VPL NG++G R+ LI  +     + V +  + +  R VAG G  W D  +  
Sbjct: 117 EQQAIPVRVPLLNGIMGYRVSLIRQNTLHEFNNVRSAPDLK--RFVAGQGHDWPDFQI-- 172

Query: 148 SNHLPFYIQNGEWRGLYKKLSVSGAVNYFPRGVTE--IYQESILNPHLAIEQHLLFQYQR 205
             H  F         +  +L  +G ++YFPR   E  +  +S+ +P + IE  +L  Y  
Sbjct: 173 LEHNGFTALGTSNYDIIIELLKAGRIDYFPRAAHEAVVEAKSLNDPDIIIEPSVLLYYPS 232

Query: 206 DFKFYLSPQAAQYQALLEQALKAAQESGLMRELTEKY--WGESLSLLRLDQRQVIELQVP 263
              F++S    +    +E+ L  A++ G    L EKY  + +    L+L +R V++L  P
Sbjct: 233 YMFFFVSQSKPELAQRIERGLNIARQDGSFAALFEKYINFKDIEKALKLSERTVLKLNNP 292