Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  101 bits (252), Expect = 4e-26
 Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 3/168 (1%)

Query: 169 RKIENSLLYLASRDPLTGAHNRLS--LTTSFQHFERFSDQTSLCLLVIDLDFFKSINDQF 226
           R+ + S   LA+ D LTG +NR S  L  +    E   D + L  L+IDLD FK++ND  
Sbjct: 319 RRHQASTEALATLDSLTGLYNRRSFDLLAAQALREARRDSSPLVALLIDLDHFKALNDNH 378

Query: 227 GHDTGDKVLIETTRLFTQVVGDNN-LYRIGGEEFCVTLFDQSLEQAGRVCEHLRAIVSQH 285
           GH  GD+VL +   +    +  ++ L R GGEEF V L +    QA  V E +R    Q 
Sbjct: 379 GHLAGDEVLRQFANVLQGSLRQSDILCRWGGEEFIVLLREAEGRQAIEVAEKIRRRTEQL 438

Query: 286 LFAFREKRVQVTISIGVCEYQAGDQLNDLLKFADMELYRAKKAGRNQV 333
            F++  + +++T SIG+   Q GD L+ LL  AD  LYRAK+AGRN+V
Sbjct: 439 TFSYDNQPLRLTTSIGLSSLQPGDTLHALLTRADRALYRAKQAGRNRV 486