Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1510 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  104 bits (259), Expect = 2e-26
 Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 9/187 (4%)

Query: 154  YIGIWVVAHVYEDNRRKIENSLLYLASRDPLTGAHNRLSLTTSFQHF--ERFSDQTSLCL 211
            Y+ I+      + ++R+IE    +LA+ D LTG  NR  L    +H   +    +T L +
Sbjct: 1055 YVAIFSDISAIKSSQRRIE----FLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAV 1110

Query: 212  LVIDLDFFKSINDQFGHDTGDKVLIETTRLFTQVVGDNN-LYRIGGEEFCVTLFDQSLEQ 270
            L IDLD FK IND  GHD GD++L + T      V D++ L R+GG+EF   L D SLE+
Sbjct: 1111 LFIDLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEK 1170

Query: 271  AGRVCEHLRAIVSQHLFAFREKRVQVTISIGVCEY-QAGDQLNDLLKFADMELYRAKKAG 329
               V   +   +    F+  +K + V+ SIG+  +   G     LLK AD  +YRAK+ G
Sbjct: 1171 VNSVAARIVDFLGAS-FSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERG 1229

Query: 330  RNQVRLF 336
            RNQ + F
Sbjct: 1230 RNQYQFF 1236