Pairwise Alignments

Query, 353 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Stalked cell differentiation-controlling protein from Alteromonas macleodii MIT1002

 Score =  104 bits (260), Expect = 3e-27
 Identities = 100/346 (28%), Positives = 154/346 (44%), Gaps = 42/346 (12%)

Query: 13  RASVLCGLSFFWALIAFLMALINFWSTRLVELASLELVCAFYSLYIYS-LAKRRIHTKQQ 71
           R   L  +S+    I   MA IN  +   + + +L    AF    +Y+ +A   +  +  
Sbjct: 23  RRLTLYFISYVGGTIMAFMAWINMGTNNPLLVGTLAGSAAF----VYANVALSHMFPRVD 78

Query: 72  VYLYL-----------FILTG----TTLFATYMKPLMMGVYIWSCFVPILFYIFTSARFA 116
           V+ YL            + TG    T L+  ++ PL+    +   F P + Y+  +   A
Sbjct: 79  VFYYLAGLVVAFTINGLVYTGGLNNTGLY--FIFPLLFIQIVVVRFKPAMVYVAVTMGIA 136

Query: 117 FVTSCLFLIIQSNIIYWQLQQTGAALSWSVLLHLCFAYIG--IWVVAHVYEDNRRKIENS 174
                  L  Q  I+     +  +    +    +C A+IG   W     ++  +  +  +
Sbjct: 137 I----FMLYNQEKIVAEYPAEHVSRFLIATFCFICVAFIGENFW-----HQSRKEMLREN 187

Query: 175 L--LYLASRDPLTGAHNRLSLTTSFQHFERFSDQTS----LCLLVIDLDFFKSINDQFGH 228
           L  +  A+ DPLT   NR  L   F  FER          L  +V+D+D FK+IND +GH
Sbjct: 188 LERMRQANTDPLTKLPNRRFLEAVF--FERAMQDPGAHFPLSAVVVDIDHFKTINDTYGH 245

Query: 229 DTGDKVLIETTRLFTQVVGDNNLY-RIGGEEFCVTLFDQSLEQAGRVCEHLRAIVSQHLF 287
           D GD+VLI  TRL  + V   ++  R GGEEF V     +L QA ++ E +R +V  + F
Sbjct: 246 DIGDEVLIHITRLMKEAVRTTDVVARTGGEEFLVLFPHATLSQAVKLAEKMRKVVEANPF 305

Query: 288 AFREKRVQVTISIGVCEYQAGDQLNDLLKFADMELYRAKKAGRNQV 333
              +    +T S GV        L+  LK AD  LY+AK AGRN+V
Sbjct: 306 VEGDVNHSITASFGVATALTDTNLHACLKQADDNLYKAKNAGRNRV 351