Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 8e-19
 Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 8/229 (3%)

Query: 39  IGLCPALLYAQSSPNAEDKLVRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQGYQVEFQ 98
           + L   LL AQ    A  + +R+ +  WPPF  + L N G   +I++ A  + GY  +F+
Sbjct: 8   VALIGVLLLAQP---AFAQRLRLVADAWPPFTDATLINGGLATDIVSTALARAGYASDFE 64

Query: 99  FLPWARAYAETQRGLYDATA-IWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWKTLS 157
            +PWARA      G YD     W   A  ++  F S         F      P +++ L 
Sbjct: 65  QVPWARALMGVGDGRYDVLVNAWYDDARTQLGQF-SGEYLLNRVRFIKRRDDPIEFQNLE 123

Query: 158 DLAPYKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYY 217
            L  Y +  V  Y+Y    D       + +    +A +    LA  RV L  E++++  Y
Sbjct: 124 QLHDYPIAVVRGYAYSAAFDGDAQLQKVPVHNFAMAVR---MLAAQRVRLTVEDEYVARY 180

Query: 218 LINQQIPHLQDLITHHPTPFLTNSNYLLFPKQSARSQELLGVFNHYLVQ 266
            ++++   +++ +   P P   NS ++L   ++    +++  F+  + +
Sbjct: 181 YLSRESTRVRNTVEFLPKPLSENSLHILVSLKNPEHAQIVASFDREIAK 229