Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

 Score = 82.8 bits (203), Expect = 7e-21
 Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 9/211 (4%)

Query: 45  LLYAQSSPNAEDKLVRIASGEWPPFI--GSDLPNYGFVGEIITQAFTKQGYQVEFQFLPW 102
           LL    SP A  + +R+ + +W P++   +  P  G   E+ +Q F + G +VE+QFLPW
Sbjct: 11  LLLVCLSPLALGERLRLVTDDWAPYVFQHNGQPR-GIDYEVASQVFARLGVEVEWQFLPW 69

Query: 103 ARAYAETQRGLYDATA-IWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWKTLSDLAP 161
            R  A  ++GL D    I+   A +    + + P+S+ EFV F    +      L DLA 
Sbjct: 70  KRCLAMAEQGLADGILDIFQTDARQPYMVYGAEPMSEVEFVLFQSRSRRHAVTHLDDLAG 129

Query: 162 YKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYYLINQ 221
             +G    Y+YGK      ++     E       N  KL  GR+DLV  ++ +G+YL+ Q
Sbjct: 130 LTVGTSPGYAYGK---GFTEAPHFKREAAPTQEANFGKLILGRIDLVITDRRVGHYLLRQ 186

Query: 222 QIPHLQDLITHHPTPFLTNSNYLLFPKQSAR 252
               LQ  +   P      + YL   ++  R
Sbjct: 187 L--GLQQQVEELPLVISRQAQYLGLVRKPGR 215