Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., lysine-arginine-ornithine-binding periplasmic protein from Alteromonas macleodii MIT1002

 Score =  119 bits (297), Expect = 9e-32
 Identities = 81/228 (35%), Positives = 117/228 (51%), Gaps = 4/228 (1%)

Query: 36  LLIIGLCPALLYAQSSPNAEDKLVRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQGYQV 95
           LLI     AL+  QS  +A  KL RIA+ E+ P+  +D+ + G++  II  AF + G  V
Sbjct: 4   LLIATFILALVPMQSFAHAWMKL-RIATTEYAPYTSTDMQHDGYINHIIADAFLETGVVV 62

Query: 96  EFQFLPWARAYAETQRGLYDATAIWMHSAEREIDFFYSLPVSQEEFVFFYPVKK-PFDWK 154
           EF  LPW  A   T +G YDA +       RE +FF+S P+S E  VF+   +K P  W 
Sbjct: 63  EFVSLPWEEALEATLKGEYDAISYGNFVRARESEFFHSNPISAESLVFYVNAEKGPDTWA 122

Query: 155 TLSDLAPYKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHI 214
            LSDL   K+G    Y Y  EL A + S    +E       NL+ L  G++D+ P ++  
Sbjct: 123 ELSDLKDLKMGVTEGYLYNDELAAYIKSSSNVVE-STTDKDNLQALIDGKIDVFPIDELT 181

Query: 215 GYYLINQQIPHLQDLITHHPTPFL-TNSNYLLFPKQSARSQELLGVFN 261
           G+YL+ +              PF+ T + +LL PK  + SQ +L +FN
Sbjct: 182 GWYLLQRDFDSGDRRDVMPIKPFISTVTTHLLVPKGESDSQLILSLFN 229