Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., multidrug resistance protein B from Pseudomonas simiae WCS417

 Score =  129 bits (325), Expect = 2e-34
 Identities = 100/402 (24%), Positives = 184/402 (45%), Gaps = 16/402 (3%)

Query: 19  LPMFLAAVDQTLLATATPAIVRDLG-NLQLSSWIAIGYMLASAASVPVYGWLGDQYGRKP 77
           L  F+  +D T+   A P I  +LG + +  +W+   + +++A ++P+ GWL  ++G   
Sbjct: 21  LATFMQVLDTTIANVALPTISGNLGVSSEQGTWVITSFAVSNAIALPLTGWLSRRFGEVK 80

Query: 78  MLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRERARFQ 137
           + + A  +F L S +C  + +MP L+A R++QGL +G L  ++Q L+  + PP  R    
Sbjct: 81  LFLWATLLFVLASFLCGISTSMPELIAFRVIQGLVAGPLYPMTQTLLIAVYPPARRGMAL 140

Query: 138 GYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQF----VQSSRK 193
              + +  VA I GP+LGG +    SW W+F+ N+P +GI    + R Q     V++S +
Sbjct: 141 ALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVP-IGIFAVMVVRSQLKKRPVETSYQ 199

Query: 194 SEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAF-VLTSLLFIAQQKRV 252
               + +  LI+    + +I+      G+   WF    I + +A  V+   +F+  +   
Sbjct: 200 PMDYVGLLSLIVGVGALQIIL----DKGNDLDWFESNFIIIGAAISVIALAVFVIWEMTD 255

Query: 253 TASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSC 312
               + LRL A R   I  +   +  A  F +   LP +LQ  +   A  +GL + P+  
Sbjct: 256 KHPVVNLRLFAYRNFRIGTIVLILGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGI 315

Query: 313 GIIGGAYTTGKVIAKTGVPKFLPVFGMSLS-SCAFAVLAMFSLSAPVVSAIAALCGLGLG 371
             +  +   GK   K  +     +  +++  SC         +    ++ +    G+G+ 
Sbjct: 316 LPVLMSPFVGKYAHKFDLRLLAGLAFLAIGLSCFMRAGFTNEVDFQHIALVQLFMGIGVA 375

Query: 372 T-VMPSTQVLVQTLAGKA---NLGRITAMASLSRSLGASVGT 409
              MP+  +L+  L         G  T + +L  S  AS+ T
Sbjct: 376 LFFMPTLSILMSDLPPHQIADGAGLATFLRTLGGSFAASLTT 417