Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

 Score =  158 bits (400), Expect = 3e-43
 Identities = 124/452 (27%), Positives = 201/452 (44%), Gaps = 16/452 (3%)

Query: 20  PMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAI-GYMLASAASVPVYGWLGDQYGRKPM 78
           P+FL  +D +++ATA P I + L    L   +AI  Y+L+ A  +PV GWL +++G + +
Sbjct: 15  PLFLQNLDTSVMATALPTIAKALDVSVLHLNLAITSYLLSLAVFLPVSGWLAERFGPRRV 74

Query: 79  LMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRERARFQG 138
             +A++ F+LGS +C  A  +P LVA R++QGLG   ++ + + ++   VPP +      
Sbjct: 75  FCVAVAFFSLGSTLCGAAQTLPQLVAFRVLQGLGGAMMLPVGRLILLRSVPPAQMVSAMV 134

Query: 139 YFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSRKSEASI 198
           +F+   A   + GP+ GG +VT  SW+W+F  N+P   +A+    RF        S A  
Sbjct: 135 WFTVPPAFGRLAGPLFGGAIVTLASWRWIFLINIPFGLLAIAGALRFINDLPEDSSPAPF 194

Query: 199 DVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAF-VLTSLLFIAQQKRVTASFL 257
           D+ G +L    +T ++  L   G       V +I  ++ F VL SL++  + +   A  +
Sbjct: 195 DIEGFVLLAVGLTSLLGSLEMVGKSL--LPVPAIWAMAGFGVLVSLVYHLRSRNKAAPLI 252

Query: 258 PLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSCGIIGG 317
            L +L        ++        + A  F LP+ LQLG  ++   SG L +  + G +  
Sbjct: 253 DLGILRFSTYRASIIGGTPLRIAIGASPFLLPLMLQLGFGLSPLASGSLTMATALGSLAT 312

Query: 318 AYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPVVSAIAALC--GLGLGTVMP 375
                K I   G    L V    L+S  +     F  S P V     L   GL     M 
Sbjct: 313 RTVMAKAIRTIGFRSLL-VGATCLTSLFYVSYGHFRPSTPHVQIFVTLLFGGLVNSMAMV 371

Query: 376 STQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLLPGLSPNSGLQAIAAL 435
           S Q L  +   K  +     + S+++ L  S+G     TL+   L      SG   + A 
Sbjct: 372 SLQTLGFSQIPKPRMSHAATLNSMAQQLSLSLGVTLGATLV--TLAAWWNGSGADRLTA- 428

Query: 436 PQSEILHAFQIGFAVAALLALLGALNALRAPK 467
                   F   F V   + LL  L+  +  K
Sbjct: 429 ------EDFSPAFGVVGAMTLLSLLSFTKLSK 454