Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

 Score =  226 bits (576), Expect = 1e-63
 Identities = 128/403 (31%), Positives = 229/403 (56%), Gaps = 19/403 (4%)

Query: 21  MFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLASAASVPVYGWLGDQYGRKPMLM 80
           M + A++ T+++T  P I  +LG L L SW+   ++LA  A   V+G L D YGRKP++ 
Sbjct: 1   MAMVAIEATIVSTVMPQIASELGGLHLYSWVFASFLLAQTAMTVVFGKLSDLYGRKPIMF 60

Query: 81  IALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRERARFQGYF 140
           + ++IF LGSV+  FA +MP ++  R++QG+G+G +  +S  ++G+L P RER + QGY 
Sbjct: 61  VGIAIFVLGSVLAGFAWSMPAMICFRLIQGIGAGAIQPVSLTIVGDLYPARERGKVQGYL 120

Query: 141 SSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSRKSEASIDV 200
           +S++AV+++ GP++G ++V  LSW W+FW N+P +G+A          ++     +SID+
Sbjct: 121 ASVWAVSAVVGPMIGALIVQKLSWAWIFWVNVP-IGLAAAAGFWLYLHEAPSVRRSSIDI 179

Query: 201 AGLILF-----PSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKRVTAS 255
           AG +LF       M+ L  + +   G    W +V        F +T +LF+ Q++R    
Sbjct: 180 AGAVLFTIGIAALMIALTDFGIGDTGSAALWTAV--------FAVTLVLFVMQERRAADP 231

Query: 256 FLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSCGII 315
            + L+L   R I     +  +    L  +  FLP+++Q+ L+ ++  +GL L  +  G  
Sbjct: 232 MVSLKLWGARIIATVNGAAMLGGMVLIGITTFLPMYVQVVLQRSSVTAGLTLTMVMLGWP 291

Query: 316 GGAYTTGKVIAKTGVPKFLPVFG--MSLSSCAFAVLAMFSLSAPVVSAIAA-LCGLGLGT 372
            GA  T +   + G+ + + + G  + + + AFA+L+  + S P+++A+ + + GLG+G 
Sbjct: 292 IGATLTSRTFHRIGLWRMVLIGGALIPVGTAAFALLS--AGSTPLLAAVGSFIMGLGMGV 349

Query: 373 VMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTL 415
           +  ++ +L+Q     A  G  TA    SR+LG+++G  FFG +
Sbjct: 350 MSLASLILIQEAVDVAQRGVATASNVFSRNLGSALGATFFGAV 392



 Score = 29.3 bits (64), Expect = 3e-04
 Identities = 17/73 (23%), Positives = 32/73 (43%)

Query: 347 AVLAMFSLSAPVVSAIAALCGLGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGAS 406
           +VLA F+ S P +     + G+G G + P +  +V  L      G++    +   ++ A 
Sbjct: 70  SVLAGFAWSMPAMICFRLIQGIGAGAIQPVSLTIVGDLYPARERGKVQGYLASVWAVSAV 129

Query: 407 VGTAFFGTLIYSL 419
           VG      ++  L
Sbjct: 130 VGPMIGALIVQKL 142



 Score = 28.5 bits (62), Expect = 5e-04
 Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 17/124 (13%)

Query: 13  IFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLASAASVPVYGWLGDQ 72
           I  T FLPM++  V Q    TA   +      + +  W  IG  L S     +  W    
Sbjct: 258 IGITTFLPMYVQVVLQRSSVTAGLTL-----TMVMLGW-PIGATLTSRTFHRIGLW---- 307

Query: 73  YGRKPMLMIALSIFALGSVICAF--AMNMPWLVA-GRIVQGLGSGGLMSLSQALIGELVP 129
                M++I  ++  +G+   A   A + P L A G  + GLG G +   S  LI E V 
Sbjct: 308 ----RMVLIGGALIPVGTAAFALLSAGSTPLLAAVGSFIMGLGMGVMSLASLILIQEAVD 363

Query: 130 PRER 133
             +R
Sbjct: 364 VAQR 367