Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Drug resistance transporter, EmrB/QacA family from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 1e-39
 Identities = 126/461 (27%), Positives = 209/461 (45%), Gaps = 19/461 (4%)

Query: 4   PVDRKTFLGIFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLS-SWIAIGYMLASAAS 62
           P+D  T   I + V +  F+ ++D T+L TA PA+ R L    L    + I YML  A  
Sbjct: 6   PLDPVTARWIPWVVAIAFFMQSLDGTILNTALPAMARSLAEDPLRMQGVIIAYMLTVALL 65

Query: 63  VPVYGWLGDQYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQA 122
           +P  GW+ D++G K +   A+ +F+ GS++CA A ++ +L+  R+VQGLG   ++ + + 
Sbjct: 66  IPASGWIADRFGTKRIFFSAILLFSFGSLLCAAANSLGFLIFARVVQGLGGALMLPVGRL 125

Query: 123 LIGELVPPRERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRL 182
           ++    P  E  R   + +    +  + GP +GG LV  LSW W+F  NLP VG+ L  +
Sbjct: 126 VVLRAYPRSELVRIMSFITIPGLLGPLLGPTVGGWLVEILSWHWIFLLNLP-VGL-LGCI 183

Query: 183 ARFQFVQSSRKSE-ASIDVAGLILFPSMMTLIIYWLSAGGH-YFPWFSVTSISLVSAFVL 240
           A ++F+   R +E  + D  G +LF + M LI   +   G  + P   V  + L +    
Sbjct: 184 AVWKFIPDLRGAERTTFDGPGFLLFGAAMVLITIAMEGLGELHLPHLRV-MLLLFAGMAC 242

Query: 241 TSLLFIAQQKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNA 300
            +  ++   +     F P  L   R   I +L          AL F +P+ LQ+ L  + 
Sbjct: 243 LAAYWLRAGRDPEPLFSP-SLFRVRTFAIGILGNLFARLGSGALPFLVPLLLQVALGYSP 301

Query: 301 AQSGLLLIPLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPVVS 360
           AQ+G+ +IPL+   +        +I + G  + +      L     A L +     P   
Sbjct: 302 AQAGMSMIPLAAAAMLAKSIARPLIERFGY-RIILTGNTLLLGILLASLGLVDEQTPYWL 360

Query: 361 AIAALCGLGLGTVMPSTQVLVQTL--AGKANLGRITAMASLSRSLGASVGTAFFGTLIYS 418
            +  L  LG    M  T +   TL     A+     ++ S+   L  S+G A  G    +
Sbjct: 361 LLVQLGLLGAVNSMQFTAMNTVTLIDLDDASASSGNSLLSVVAQLSLSLGVACAG----A 416

Query: 419 LLPGLSPNSGLQAIAALPQSEILHAFQIGFAVAALLALLGA 459
           LL G +     + +        L AFQ+ F    ++A+L A
Sbjct: 417 LLGGFTAAGSAEGV-----ETTLGAFQLTFVTIGVMAMLAA 452