Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Drug resistance transporter, EmrB/QacA family from Pseudomonas putida KT2440

 Score =  282 bits (721), Expect = 2e-80
 Identities = 166/468 (35%), Positives = 261/468 (55%), Gaps = 10/468 (2%)

Query: 13  IFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLASAASVPVYGWLGDQ 72
           +   + L +FL A+DQT++A + PAI     ++ L +W+  GYM+A   +VP+YG LGD 
Sbjct: 13  VLTALMLAIFLGALDQTIVAVSLPAISAQFSDVGLLAWVISGYMVAMTVAVPIYGKLGDL 72

Query: 73  YGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRE 132
           YGR+ M++  +S+F L S+ CA A +MP LV  R++QG+G+GG++S+SQA+IG+ VPPRE
Sbjct: 73  YGRRRMILTGISLFTLASIACAMAQDMPQLVLARVLQGIGAGGMVSVSQAIIGDFVPPRE 132

Query: 133 RARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSR 192
           R R+QGYFSS++A AS+ GPVLGG L  YLSW+W+FW NLPL  +AL+ + R       +
Sbjct: 133 RGRYQGYFSSMYAAASVAGPVLGGWLTEYLSWRWVFWINLPLGLVALWAIRRALADMPVQ 192

Query: 193 KSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKRV 252
           + EA +D  G +L    +  ++  ++  G    W     ++L    +L   LFIA ++R 
Sbjct: 193 RREAQVDYLGAMLLILGLGSLLLGITLVGQGHAWADPAVLALFGCALLGLALFIAHERRC 252

Query: 253 TASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSC 312
               LPL L   R   +     F  +    +L   +P+  Q      A  + L L+PL+ 
Sbjct: 253 PEPLLPLSLFGNRVAVLCWAVIFFASFQSISLTMLMPLRYQGITGAGADSAALHLLPLAM 312

Query: 313 GIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPVVSAI-AALCGLGLG 371
           G+  GA+T G++ ++TG  K   + G  L   A   +A+    + ++SA+   L G+  G
Sbjct: 313 GLPMGAFTGGRMTSRTGRYKPQILAGALLMPVAIFAMALTPPQSALLSALFMLLTGIACG 372

Query: 372 TVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLLP----GLSPNS 427
              P++ V  Q+     ++G  T+  +L RSLG ++G A   +L+ +LL      LS N 
Sbjct: 373 LQFPTSLVGTQSAVASKDIGVATSTTNLFRSLGGAMGVACMSSLLLALLHQGGFELSGNP 432

Query: 428 GLQAIAAL-----PQSEILHAFQIGFAVAALLALLGALNALRAPKIQL 470
            L ++ A       Q  +L  F+     +A++A+LG L AL  P  QL
Sbjct: 433 LLGSLKAAEVDPGTQGRLLETFRQLLMGSAVVAVLGLLAALALPDRQL 480