Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., Multidrug transporter MdtD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  147 bits (371), Expect = 8e-40
 Identities = 122/457 (26%), Positives = 207/457 (45%), Gaps = 34/457 (7%)

Query: 22  FLAAVDQTLLATATPAIVRDLGNLQLSS-WIAIGYMLASAASVPVYGWLGDQYGRKPMLM 80
           F+ ++D T++ TA P++ + LG   L    + + Y+L  A  +P  GWL D+ G + +  
Sbjct: 20  FMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFF 79

Query: 81  IALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRERARFQGYF 140
            A+ +F LGS+ CA +  +  LV  R++QG+G   ++ + +  + ++VP   RA++    
Sbjct: 80  AAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVP---RAQYMAAM 136

Query: 141 SSLFAVASIG---GPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSRKSEAS 197
           + +     IG   GP LGGVLV Y SW W+F  N+P VGI +  +A F  + +       
Sbjct: 137 TFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIP-VGI-VGAMATFMLMPNYIIETRR 194

Query: 198 IDVAGLILFPSMMTLIIYWL--SAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKRVTAS 255
            D+ G +L    M ++   L  S      PW   T   L +      LL++   K+ + +
Sbjct: 195 FDLPGFLLLAIGMAVLTLALDGSKSMGISPW---TLAGLAAGGAAAILLYLFHAKKNSGA 251

Query: 256 FLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSCGII 315
              LRL       + LL +F        L F  P+FLQ+GL  +   +GL++IP+  G +
Sbjct: 252 LFSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSM 311

Query: 316 GGAYTTGKVIAKTGVPKFL--PVFGMSLSSCAFAVLAMFS--LSAPVVSAIAALCGLGLG 371
           G      +++ + G  + L     G++L S  F  +A+       P+V  +  +      
Sbjct: 312 GMKRIVVQIVNRFGYRRVLVATTLGLALVSLLFMSVALLGWYYLLPLVLLLQGMVNSARF 371

Query: 372 TVMPSTQV--LVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLLPGLSPNSGL 429
           + M +  +  L  TLA   N     ++ S+   L  S+G    G L+           G 
Sbjct: 372 SSMNTLTLKDLPDTLASSGN-----SLLSMIMQLSMSIGVTIAGMLLGMF--------GQ 418

Query: 430 QAIAALPQSEILHAFQIGFAVAALLALLGALNALRAP 466
           Q I  +  S   H F   +   A++  L A+   R P
Sbjct: 419 QHI-GIDSSATHHVFMYTWLCMAVIIALPAIIFARVP 454