Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., drug resistance transporter, EmrB/QacA subfamily from Enterobacter asburiae PDN3

 Score =  150 bits (379), Expect = 9e-41
 Identities = 118/415 (28%), Positives = 194/415 (46%), Gaps = 21/415 (5%)

Query: 8   KTFLGIFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAI-GYMLASAASVPVY 66
           ++  G+ +   +  F+ A+D T+L TA PAI + L    L+   AI  Y L  A  +PV 
Sbjct: 7   RSMAGLPWIAAMAFFMQALDATILNTALPAIAQSLNRSPLAMQSAIISYTLTVAMLIPVS 66

Query: 67  GWLGDQYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGE 126
           GWL D++G + + M+A+++F LGS+ CA + ++  LV  R++QG+G   +M +++  +  
Sbjct: 67  GWLADRFGTRRVFMLAVTLFTLGSLACALSSSLTELVIFRVLQGIGGAMMMPVARLALLR 126

Query: 127 LVPPRERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQ 186
             P  E      + +    V  I GPVLGGV VT+ SW W+F  N+P +G+A    AR +
Sbjct: 127 AYPRSELLPVLNFVTMPGLVGPILGPVLGGVFVTWASWHWIFLINIP-IGVAGLLYAR-K 184

Query: 187 FVQSSRKSEASIDVAGLILFPSMMTLIIYWLSAGGHYF--PWFSVTSISLVSAFVLTSLL 244
           ++ +      S D+ G  LF   + L    +   G      W    ++S++   +L  LL
Sbjct: 185 YMPNFTTPRRSFDMGGFFLFGLSLVLFSSGMELFGEKIVATWL---ALSVILGGILLFLL 241

Query: 245 FIAQQKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSG 304
           +I   +R     + L L   R   + +            + F +P+ LQ+G    A  +G
Sbjct: 242 YIRHARRHPTPLISLGLFNTRTFSVGIAGNIASRLGTGCVPFLMPLMLQVGFGYPALIAG 301

Query: 305 LLLIPLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSA---PVVSA 361
            ++ P + G I    T  +V+   G  K L    + ++     ++A FSL +   PV   
Sbjct: 302 CMMAPTAMGSILAKSTVTQVLRWFGYRKTL----VGVTVFIGLMIAQFSLQSAALPVWML 357

Query: 362 IAALCGLGLGTVMPSTQVLVQTLAG----KANLGR--ITAMASLSRSLGASVGTA 410
           I  L  LG+      T +   TLA      A+ G   +     LS SLG +V  A
Sbjct: 358 ILPLFVLGMAMSTQFTSMNTITLADLTDENASSGNSVLAVTQQLSISLGVAVSAA 412