Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  133 bits (334), Expect = 1e-35
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 8/334 (2%)

Query: 22  FLAAVDQTLLATATPAIVRDLGNLQLSS-WIAIGYMLASAASVPVYGWLGDQYGRKPMLM 80
           F+ ++D T++ TA P++ + LG   L    + + Y+L  A  +P  GWL D+ G + +  
Sbjct: 20  FMQSLDTTIVNTALPSMAKSLGESPLHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFF 79

Query: 81  IALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRERARFQGYF 140
            A+ +F  GS+ CA A  +  LV  R++QG+G   ++ + +  + ++VP  +      + 
Sbjct: 80  TAIVLFTTGSLFCAQANTLDQLVMARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFV 139

Query: 141 SSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSRKSEASIDV 200
           +    V  + GP LGG+LV Y SW W+F  NLP VGI +  +A    + + +      D 
Sbjct: 140 TLPGQVGPLLGPALGGILVEYASWHWIFLINLP-VGI-IGAIATLTLMPNYKMQTRRFDF 197

Query: 201 AGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKRVT-ASFLPL 259
            G IL  + M  +   L+  G      S  ++ L+ A  +T++L+  +  R    +   L
Sbjct: 198 FGFILLAAGMATLT--LALDGQKGLGISPLTLGLLIALGVTAILWYLRHARGNDKALFSL 255

Query: 260 RLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSCGIIGGAY 319
            L       + L  +F        L F  P+FLQ+G+  +   +GL++IP+  G +G   
Sbjct: 256 NLFKNPTYRLGLFGSFAGRVGSGMLPFMTPVFLQIGMGFSPFHAGLMMIPMVLGSMGMKR 315

Query: 320 TTGKVIAKTGVPKFL--PVFGMSLSSCAFAVLAM 351
              +V+ + G    L     G++L S  F  +A+
Sbjct: 316 IVVQVVNRFGYRHVLVTATLGLALVSLLFMGVAL 349