Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., multidrug efflux MFS transporter permease subunit EmrB from Dickeya dianthicola ME23

 Score =  130 bits (327), Expect = 1e-34
 Identities = 106/424 (25%), Positives = 189/424 (44%), Gaps = 19/424 (4%)

Query: 3   QPVDRKTFLGIFFTVFLPMFLAAVDQTLLATATPAIVRDLG--NLQLSSWIAIGYMLASA 60
           +P++  T   +   + L  F+  +D T+   A P I  +LG  N Q  +W+   + +A+A
Sbjct: 4   KPLEGMTLALMTIALSLATFMQVLDSTIANVAIPTIAGNLGASNSQ-GTWVITSFGVANA 62

Query: 61  ASVPVYGWLGDQYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLS 120
            S+P+ GWL  ++G   + + A  +F L S +C  + ++  L+  R++QGL +G ++ LS
Sbjct: 63  ISIPITGWLAKRFGEVRLFIWATVLFTLTSWLCGMSTSLEMLIVSRMLQGLVAGPIIPLS 122

Query: 121 QALIGELVPPRERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALY 180
           Q+L+    PP +R      +S    VA I GP+LGG +     W W+F+ N+PL  + + 
Sbjct: 123 QSLLLNNYPPAKRGIALALWSMTVVVAPIFGPILGGWISDNYHWGWIFFINVPLGLLVVL 182

Query: 181 RLARFQFVQSSRKSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVL 240
              +    + ++     ID  GLIL  + +  +   L  G     WF+ T I  ++   +
Sbjct: 183 ITLQTLRGRETKTEIRPIDTIGLILLAAGIGCLQMMLDRGKE-LDWFNSTEIVALAVIAV 241

Query: 241 TSL-LFIAQQKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVN 299
            SL + +  +       + L L   R   I  L T +     F  I  LP  LQ+     
Sbjct: 242 VSLTVLVVWELTDDHPVVDLSLFKMRNFTIGCLCTSLAFMLYFGAIVLLPQLLQVVFGYT 301

Query: 300 AAQSGLLLIPLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSC------AFAVLAMFS 353
           A  +GL   P+    +  +   G+ + K  + + +    +  + C       F     F 
Sbjct: 302 ATWAGLASAPVGLMPVILSPLIGRFMHKLDMRRLVTFSFIMYAVCFYWRAYTFEPAMNFG 361

Query: 354 LSA--PVVSAIAALCGLGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAF 411
            SA    V   A  C       MP T + +  L  +  +   +++++ +R+L  S+GT+ 
Sbjct: 362 ASAWPQFVQGFAVAC-----FFMPLTTITLSGLPPE-RMAAASSLSNFARTLAGSIGTSV 415

Query: 412 FGTL 415
             TL
Sbjct: 416 TTTL 419