Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., putative multidrug or homocysteine efflux system from Escherichia coli BL21

 Score =  152 bits (384), Expect = 2e-41
 Identities = 120/420 (28%), Positives = 196/420 (46%), Gaps = 29/420 (6%)

Query: 7   RKTFLGIFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAI-GYMLASAASVPV 65
           +++  G+ +   +  F+ A+D T+L TA PAI   L    L+   AI  Y L  A  +PV
Sbjct: 6   KRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVAMLIPV 65

Query: 66  YGWLGDQYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIG 125
            GWL D++G + +  +A+S+F LGS+ CA + ++P LV  R++QG+G   +M +++  + 
Sbjct: 66  SGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVARLALL 125

Query: 126 ELVPPRERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARF 185
              P  E      + +    V  I GPVLGGVLVT+ +W W+F  N+P +GIA    AR 
Sbjct: 126 RAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIP-IGIAGLLYAR- 183

Query: 186 QFVQSSRKSEASIDVAGLILFPSMMTLIIYWLSAGGHYF--PWFS----VTSISLVSAFV 239
           + + +   +    D+ G +LF   + L    +   G      W +    VTSI L+    
Sbjct: 184 KHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLL---- 239

Query: 240 LTSLLFIAQQKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVN 299
              LL+I   +R     + L L   R   I ++           + F +P+ LQ+G    
Sbjct: 240 ---LLYILHARRTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQ 296

Query: 300 AAQSGLLLIPLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPVV 359
           A  +G ++ P + G I       +V+ + G    L    + ++     ++A FSL +P +
Sbjct: 297 AFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTL----VGITVIIGLMIAQFSLQSPAM 352

Query: 360 S---AIAALCGLGLGTVMPSTQVLVQTLA----GKANLGR--ITAMASLSRSLGASVGTA 410
           +    I  L  LG+      T +   TLA      A+ G   +     LS SLG +V  A
Sbjct: 353 AIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAA 412