Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., putative transporter from Escherichia coli BL21

 Score =  152 bits (384), Expect = 2e-41
 Identities = 119/418 (28%), Positives = 188/418 (44%), Gaps = 26/418 (6%)

Query: 12  GIFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSS-WIAIGYMLASAASVPVYGWLG 70
           G   T+ + + +A +D  +   A P I  DL     SS W+   Y +A   S+  + +LG
Sbjct: 16  GAILTIVIGISMAVLDGAIANIALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFLG 75

Query: 71  DQYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPP 130
           D +G + +    L +F L S+ CA + ++  L   R++QG G   LMS++ ALI  + P 
Sbjct: 76  DMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYPQ 135

Query: 131 RERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQS 190
           R   R  G  S + AV+S  GP +   +++  SW+WLF  N+PL  IAL    RF     
Sbjct: 136 RFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPNG 195

Query: 191 SRKSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSA----FVLTSLLFI 246
           SR S+   D+   ++      L+I  LS       +    S++L++A     V+  + FI
Sbjct: 196 SRASKPRFDLPSAVMNALTFGLLITALSG------FAQGQSLTLIAAELVVMVVVGIFFI 249

Query: 247 AQQKRVTASFLPLRLLARREIHIPLLSTFI------FAACLFALIFFLPIFLQLGLRVNA 300
            +Q  +    LP+ LL      IPL S  I      F A + A++  LP +LQ  L  + 
Sbjct: 250 RRQLSLPVPLLPVDLL-----RIPLFSLSICTSVCSFCAQMLAMV-SLPFYLQTVLGRSE 303

Query: 301 AQSGLLLIPLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPVVS 360
            ++GLLL P     +  A   G +I +      L   G+ + +     L +   S   ++
Sbjct: 304 VETGLLLTPWPLATMVMAPLAGYLIERVHA-GLLGALGLFIMAAGLFSLVLLPASPADIN 362

Query: 361 AI--AALCGLGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLI 416
            I    LCG G G         + T A +   G  + M   +R LG S G A    ++
Sbjct: 363 IIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALML 420