Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 10/160 (6%)

Query: 264 RHVYIDNLTRLNNRHFLNKISTKFIEHPHSIAA-----MIDIDHFKKINDQYGHITGDRI 318
           R    D LT L NRH + +   + +   +   A     MIDIDHFK +ND++GH TGD +
Sbjct: 411 RQARFDALTGLLNRHGMEERLQQALAVSNPDTAPLGIVMIDIDHFKSVNDRFGHATGDLV 470

Query: 319 LQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKDD--HSLYGT 376
           L+AVA  ++  +R  D   R GGEEF+L+    +  EA      L + V +     +   
Sbjct: 471 LKAVAGLMKSRLRKSDIAARLGGEEFVLMLPGANAAEAMQTATDLVRLVGEAFIDPVGHI 530

Query: 377 TISIGFTFI---DGSLPAAISRADTALYQAKEAGRNQVVA 413
           TIS G + +   D S+ +A+ RAD ALY AK  GRN+ +A
Sbjct: 531 TISCGVSQMLREDDSVASALRRADKALYAAKSLGRNRAMA 570