Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 6/165 (3%)

Query: 257 LQKVAAQRHVYIDNLTRLNNRHFLNKISTKFIEHPHS--IAAMIDIDHFKKINDQYGHIT 314
           L KV  ++  Y+D LT + NR      + + +    S    AMIDID+FK++ND++GH  
Sbjct: 196 LSKVLLEQ-AYVDALTDIPNRRSFMAQADRQLRMATSGQYLAMIDIDNFKRVNDRFGHDV 254

Query: 315 GDRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKDDHSLY 374
           GD +L+ VA  ++ ++ D     R GGEEF + F+    + A   +  L QRV++D   +
Sbjct: 255 GDEVLKRVALHIKTSMAD-QAFARLGGEEFAIFFEGLDQQGAEQRVAALCQRVREDAGEH 313

Query: 375 GTTISIGFTFID--GSLPAAISRADTALYQAKEAGRNQVVADSEK 417
             TISIG   +D   SL  A+ RAD ALY+AK  G+++ V+ S +
Sbjct: 314 PVTISIGLAKVDRGESLTTALVRADQALYEAKHTGKDRFVSWSSE 358