Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 760 a.a., putative signaling protein from Pseudomonas sp. DMC3

 Score = 96.3 bits (238), Expect = 3e-24
 Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 13/171 (7%)

Query: 252 LTRLNLQKVAAQRHVYIDNLTRLNNRH-----FLNKISTKFIEHPHSIAAMIDIDHFKKI 306
           L++L+  +++ Q+    D LT L NR      F  K+S K  E        +DIDHFK+I
Sbjct: 276 LSQLDQARMSLQQAANYDALTNLINRRGFNQMFAEKLSQKTSEGGMLAVMFLDIDHFKRI 335

Query: 307 NDQYGHITGDRILQAVASCLRKNVRD-GDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQ 365
           ND  GH  GD +L+ +A  ++ +VR   D + RFGG+EF +L      +EA  M  R+  
Sbjct: 336 NDSLGHDAGDALLKVIAQHIKSSVRSHEDVVARFGGDEFCILISLRDREEARGMAQRIMH 395

Query: 366 RVKDDHSLYG----TTISIGFTFI--DG-SLPAAISRADTALYQAKEAGRN 409
           ++K+   L G     T SIG +    DG +    +  AD ALYQ+K AGRN
Sbjct: 396 KMKEPIELAGRRMVMTTSIGISLFPEDGTTCEELLKHADLALYQSKGAGRN 446