Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., two component response regulator from Agrobacterium fabrum C58

 Score = 94.0 bits (232), Expect = 9e-24
 Identities = 68/177 (38%), Positives = 91/177 (51%), Gaps = 21/177 (11%)

Query: 254 RLNLQKVAAQRHVYIDNLTRLNNRHFLNKISTKFIEH------PHSIAAMIDIDHFKKIN 307
           RLNLQ         +D LT LNNR +L+       +       P SI  M DID FK +N
Sbjct: 281 RLNLQHT--MELAIVDGLTGLNNRRYLDSHLKILFDRAAVRGRPISIC-MTDIDRFKLVN 337

Query: 308 DQYGHITGDRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRV 367
           D YGH  GD +L+  A+ +R  VR  D   R+GGEEF+++      + A  + +RLR  V
Sbjct: 338 DTYGHDVGDEVLREFAARIRSTVRGADLACRYGGEEFVVVMPDTPIELAASVAERLRAIV 397

Query: 368 KD--------DHSLYGTTISIGFTFIDGSLPA---AISRADTALYQAKEAGRNQVVA 413
           +D        D  L   T S+G     G+  A    + +AD ALY+AK AGRN+VVA
Sbjct: 398 EDKPFYVRSIDREL-SITASLGIATSSGAFGAPDEILKQADKALYEAKHAGRNRVVA 453